Manuscript Supplemental Data: Selected Ortholuge Predictions
The Ortholuge method is described in the paper Fulton DL, Li YY, Laird M, Horsman BGS, Roche FMR, Brinkman FSL. Improving the specificity of high-throughput ortholog prediction. BMC Bioinformatics, 2006. 7:270. Supplemental data for this paper is provided below.
Right click on the appropriate .out file below and save the file on your computer before opening. The results are in a tab-delimited plain text file format that you can open in your favourite spreadsheet program (Excel, etc...)
Mouse-Rat Comparisons Using Human as an Outgroup
Predictions using an EGO-derived dataset:
Predictions using a RefSeq-derived dataset:
Predictions using an MGI-derived dataset:
Pseudomonas putida and Pseudomonas syringae Comparisons Using Escherichia coli as an Outgroup
THE DATA AND SOFTWARE ARE PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES OF MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE.
This project is supported by Genome British Columbia, Genome Prairie and Genome Canada, a not-for-profit organization which is leading Canada's national strategy on genomics with $ 600 million in funding from the federal government.
© 2006 Pathogenomics of Innate Immunity: A GenomeBC Project
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